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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs4365044 chr11:3931619 A/G 0.00021 490 16.83 15.3 15.9 KM Plot
THCA rs4366711 chr16:6504969 T/C 6.71E-5 486 12.43 16.15 16.47 KM Plot
THCA rs4367542 chr8:8396737 C/G 4.06E-10 490 16.38 15.17 9.4 KM Plot
THCA rs4387301 chr10:81736399 C/T 0.000198 490 15.93 15.9 13.5 KM Plot
THCA rs4392054 chr16:20722770 C/T 5.45E-13 487 16.02 14.8 13.6 KM Plot
THCA rs4399323 chr11:4168318 C/T 5.66E-6 485 18.33 15.23 16.22 KM Plot
THCA rs4399324 chr11:4168332 C/T 5.66E-6 485 18.33 15.23 16.22 KM Plot
THCA rs4407373 chr3:139255012 G/T 3.31E-5 489 15.9 17.07 13.08 KM Plot
THCA rs4408267 chr11:93835395 G/C 4.95E-5 489 15.33 16.73 8.42 KM Plot
THCA rs4412194 chr6:28383589 A/G 9.99E-8 490 16.47 16.37 15.83 KM Plot
THCA rs4419033 chr15:41532044 A/G 0.000257 478 15.17 15.9 17.62 KM Plot
THCA rs4422417 chr4:110741610 A/G 0.000118 490 16.47 15.17 14.47 KM Plot
THCA rs4427056 chr7:16478891 G/C 3.51E-10 476 15 17.7 17.77 KM Plot
THCA rs4429652 chr3:67880368 A/G 0.000255 484 15.65 17.6 14.03 KM Plot
THCA rs4445868 chr15:41531991 C/T 0.000252 478 15.17 15.87 17.7 KM Plot